npj Systems Biology and Applications
Scope & Guideline
Pioneering Open Access Research in Systems Biology
Introduction
Aims and Scopes
- Systems Modeling and Simulation:
The journal publishes research that develops and applies mathematical and computational models to simulate biological processes, from cellular signaling pathways to tumor microenvironments. - Quantitative Analysis of Omics Data:
A core area of focus is the integration and analysis of multi-omics data (genomics, transcriptomics, proteomics, etc.) to uncover insights into biological functions and disease mechanisms. - Biological Network Dynamics:
Research on the dynamics of biological networks, including gene regulatory networks and metabolic pathways, is a significant theme, contributing to understanding cellular behavior and interactions. - Therapeutic Development and Drug Discovery:
The journal emphasizes the use of systems biology approaches to inform drug discovery, including modeling drug responses and identifying potential therapeutic targets. - Personalized Medicine:
There is a strong focus on personalized medicine, utilizing computational tools to tailor treatments based on individual patient profiles and disease characteristics. - Synthetic Biology and Bioengineering:
The journal also covers advancements in synthetic biology, including the design of biological systems and the engineering of biomolecular interactions for therapeutic purposes.
Trending and Emerging
- Artificial Intelligence and Machine Learning in Biology:
There is an increasing trend towards using AI and machine learning techniques for data analysis, predictive modeling, and drug discovery, enhancing the ability to interpret complex biological data. - Integration of Multi-Omics Approaches:
Emerging research emphasizes the integration of various omics data types to gain comprehensive insights into biological systems, reflecting a trend towards holistic understanding of cellular functions. - Computational Immunology and Cancer Research:
A growing focus on computational approaches to immunology and cancer biology is evident, with studies exploring immune responses and therapeutic strategies using systems biology frameworks. - Dynamic Systems and Temporal Modeling:
There is an increased interest in dynamic modeling approaches that consider the temporal aspects of biological systems, particularly in relation to disease progression and treatment responses. - Synthetic Biology for Therapeutic Applications:
Research in synthetic biology is gaining momentum, particularly studies that explore the engineering of biological systems for therapeutic interventions, such as engineered T cells and biomolecular circuits.
Declining or Waning
- Traditional Experimental Biology:
There is a noticeable decrease in the publication of studies strictly focused on traditional experimental biology methods, as the emphasis has shifted towards computational and systems-based approaches. - Basic Mechanistic Studies without Systems Integration:
Research that focuses solely on basic mechanistic studies without integrating systems biology perspectives appears to be waning, as there is a growing demand for studies that connect molecular mechanisms to larger biological systems. - Single-Method Approaches:
Papers that employ single-method approaches, such as purely biochemical assays or isolated cellular studies, have seen a decline in favor of multi-disciplinary research that incorporates computational modeling and systems analysis.
Similar Journals
ACTA BIOCHIMICA ET BIOPHYSICA SINICA
Fostering Global Collaboration in Biochemistry and Biophysics.ACTA BIOCHIMICA ET BIOPHYSICA SINICA, an esteemed journal published by SCIENCE PRESS, is a leading platform in the fields of biochemistry, biophysics, and molecular biology. Based in the United Kingdom, this journal has consistently ranked in the Q2 category for Biochemistry, Biophysics, and Medicine (miscellaneous) in 2023, showcasing its commitment to high-quality research and innovation in life sciences. With a convergence period extending from 1996 to 2024, it features critical insights into biochemical and biophysical processes that underlie biological phenomena. Researchers and professionals seeking to stay at the forefront of discoveries will find its articles to be both informative and transformative. Although not an open-access journal, ACTA BIOCHIMICA ET BIOPHYSICA SINICA aims to advance knowledge and foster collaboration among scientists worldwide, emphasizing its role in the dynamic landscape of biomedical research.
COMPUTATIONAL BIOLOGY AND CHEMISTRY
Illuminating the Path of Innovation in Biochemistry through Computational InsightsCOMPUTATIONAL BIOLOGY AND CHEMISTRY is a distinguished academic journal published by Elsevier Science Ltd, focusing on the dynamic intersection of computational biology, biochemistry, and chemistry. With an ISSN of 1476-9271 and an E-ISSN of 1476-928X, this journal is committed to disseminating high-quality research that employs computational techniques to solve complex biological and chemical problems. As of 2023, the journal holds a substantial impact factor reflecting its significance and rigorous peer-review process, categorized in the Q2 quartile for both Computational Mathematics and Organic Chemistry, alongside Q3 classifications in Biochemistry and Structural Biology. With a continuous publication history spanning from 2003 to 2024, it serves as a critical resource for researchers, professionals, and students alike. The journal offers various open access options, ensuring that vital research findings are accessible to a global audience, further enhancing collaboration across disciplines. Engage with cutting-edge studies and contribute to the evolving landscape of computational methodologies in the life sciences through this esteemed publication.
JOURNAL OF MATHEMATICAL BIOLOGY
Where Mathematical Rigor Meets Biological Complexity.Journal of Mathematical Biology, published by Springer Heidelberg, is a leading international journal dedicated to the interdisciplinary field of mathematical modeling and its applications in biology. With an ISSN of 0303-6812 and an E-ISSN of 1432-1416, this journal has established its prominence within the academic community, reflected in its impressive rankings: Q1 in Agricultural and Biological Sciences (miscellaneous) and Q2 in both Applied Mathematics and Modeling and Simulation as of 2023. Covering a broad scope from ecological modeling to biomathematics, the journal serves as a crucial platform for researchers, professionals, and students alike to disseminate innovative work that bridges the gap between theoretical mathematics and biological phenomena. The journal, which spans from its inception in 1974 to 2024, emphasizes rigorous research while ensuring a high level of scholarly communication through its selective review process. With its solid reputation, the Journal of Mathematical Biology continues to significantly contribute to advancements in mathematical sciences and their essential role in understanding complex biological systems.
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS
Exploring Complex Biological Processes with PrecisionBIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS, published by Elsevier, serves as a pivotal journal in the fields of biochemistry and biophysics, with a long-standing history dating back to 1956. This esteemed publication, bearing the ISSN 0304-4165 and E-ISSN 1872-8006, continuously contributes to advancing our understanding of complex biological processes through rigorous research articles and reviews. It notably holds a distinguished position with a Q2 classification in Biochemistry and a Q1 ranking in Biophysics for 2023, reflecting its high relevance and impact within these scientific domains. The journal is also recognized within the Scopus metrics, taking a rank of #40 out of 152 in Biophysics and #173 out of 438 in Biochemistry, thus placing it in the 74th and 60th percentiles respectively. Academics and professionals in the life sciences will find this journal an essential resource for current research, cutting-edge techniques, and comprehensive reviews aimed at enhancing the understanding of biological functions. While BIOCHIMICA ET BIOPHYSICA ACTA is not an open-access journal, it remains a cornerstone publication for those seeking to stay at the forefront of biochemical and biophysical research.
JOURNAL OF COMPUTATIONAL BIOLOGY
Advancing the Frontiers of Biology through ComputationJOURNAL OF COMPUTATIONAL BIOLOGY, published by Mary Ann Liebert, Inc., serves as a premier platform for the dissemination of groundbreaking research at the intersection of biological sciences and computational methods. Established in 1994, this journal provides a valuable resource for researchers, professionals, and students interested in the evolving fields of computational mathematics and biology. With a commendable Q2 ranking in several pertinent categories such as Computational Mathematics and Modeling and Simulation, it emphasizes high-quality studies that propel understanding and innovation in these areas. Although the journal currently operates under traditional access options, it plays a crucial role in fostering scholarly communication and collaboration among a diverse audience, advancing knowledge in genetics, molecular biology, and beyond. The journal's continual evolution, with a commitment to publish until at least 2024, positions it as a critical resource in the fast-paced world of computational biology.
BRIEFINGS IN BIOINFORMATICS
Fostering Innovation in Genomics and Data IntegrationBRIEFINGS IN BIOINFORMATICS is a premier academic journal dedicated to the dynamic field of bioinformatics, published by Oxford University Press. With a prestigious standing reflected in its Q1 quartile rankings in both Information Systems and Molecular Biology, this journal serves as an essential resource for researchers, professionals, and students eager to explore the intersection of biology and computational sciences. The journal not only publishes high-impact research articles but also reviews and critical commentaries that push the boundaries of understanding in bioinformatics. As it converges its objectives towards fostering innovation and knowledge dissemination from 2000 to 2024, BRIEFINGS IN BIOINFORMATICS offers rich insights that remain pivotal to advancements in genomic studies, data integration, and computational tools. Its ranking in the top percentiles of Scopus—30th among 394 in Computer Science and 44th among 410 in Molecular Biology—underscores the journal's influential presence in the academic community. Engaging with the latest research and trends, this journal is integral for anyone invested in the future of life sciences and data analytics.
Molecular Systems Biology
Exploring the Intersection of Biology and TechnologyMolecular Systems Biology, published by SpringerNature, is a premier open access journal that has been a cornerstone in advancing the fields of biological science since its inception in 2005. With its ISSN 1744-4292, this journal exemplifies high scholarly standards, boasting an impressive suite of impact factors, including Q1 rankings across various disciplines such as Agricultural and Biological Sciences, Biochemistry, Genetics and Molecular Biology, and more, highlighting its significant contribution to the scientific community. The journal offers robust access options to facilitate innovative research dissemination, reaching a global audience while maintaining a commitment to fostering collaboration and dialogue among researchers, professionals, and students. With a focus on integrating quantitative approaches to biological systems, Molecular Systems Biology plays a vital role in addressing complex biological questions, paving the way for groundbreaking discoveries and advancements in healthcare, environmental sustainability, and functional genomics.
KOREAN JOURNAL OF PHYSIOLOGY & PHARMACOLOGY
Fostering excellence in physiological and pharmacological studies.Welcome to the Korean Journal of Physiology & Pharmacology, a pivotal academic platform dedicated to advancing the disciplines of physiology and pharmacology. Published by the esteemed Korean Journal of Physiology & Pharmacology, this journal has been disseminating valuable research findings since its inception in 1997 and continues to be a critical resource for researchers, professionals, and students in South Korea and beyond. With an ISSN of 1226-4512 and E-ISSN of 2093-3827, it offers insights into various aspects of drug action and physiological mechanisms. Although this journal currently does not subscribe to Open Access, it plays a vital role in bridging the gap between experimental and clinical studies, receiving commendations for its quality. In the 2023 Scopus rankings, it is notably positioned in the Q3 quartile for Pharmacology and Q4 for Physiology, reflecting its commitment to excellence. As the journal converges towards its comprehensive coverage in 2024, it remains a cornerstone for those looking to engage deeply with critical developments in these fields.
Current Opinion in Systems Biology
Fostering groundbreaking discoveries in systems biology.Current Opinion in Systems Biology is an esteemed academic journal published by ELSEVIER, focusing on the dynamic and interdisciplinary field of systems biology. Since its inception in 2017, the journal has made significant strides in disseminating cutting-edge research and innovative perspectives across various domains, including applied mathematics, biochemistry, and drug discovery. With an impressive impact factor reflecting its prominent position as a Q1 journal in multiple categories—including Applied Mathematics, Biochemistry, and Computer Science Applications—it serves as a vital resource for researchers, professionals, and students alike. The journal embraces a comprehensive approach to understanding complex biological systems, fostering a deeper insight into the interactions within biological and computational frameworks. This makes it an essential conduit for advancing knowledge and innovation in systems biology, facilitating the development of new methodologies that could lead to groundbreaking discoveries.
CURRENT PROTEIN & PEPTIDE SCIENCE
Advancing the Frontiers of Protein and Peptide ResearchCURRENT PROTEIN & PEPTIDE SCIENCE, published by Bentham Science Publishers, is a pivotal journal dedicated to the dynamic and rapidly evolving fields of protein and peptide research. With an ISSN of 1389-2037 and an E-ISSN of 1875-5550, this esteemed journal serves as a platform for disseminating cutting-edge findings from various disciplines, including biochemistry, cell biology, and molecular biology. Recognized for its influence with a 2023 Scopus ranking placing it within the top quartiles of its categories—Q3 in Biochemistry, Q4 in Cell Biology, and Q2 in Medicine—the journal not only enhances the visibility of critical research but also supports the academic community in advancing our understanding of the molecular foundations of life. Established in 2000 and running through 2024, CURRENT PROTEIN & PEPTIDE SCIENCE is positioned to cater to the interests of researchers, professionals, and students alike, providing them with open access to vital knowledge that fuels innovation and scientific inquiry in the United Arab Emirates and beyond.